CDS

Accession Number TCMCG065C31543
gbkey CDS
Protein Id XP_004982738.1
Location join(14849584..14850264,14850914..14851864,14852036..14852125,14852203..14852271,14852750..14852890,14853157..14853205,14853934..14854037,14854141..14854659)
Gene LOC101780792
GeneID 101780792
Organism Setaria italica

Protein

Length 867aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004982681.4
Definition vacuolar-sorting protein BRO1 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category S
Description ALIX V-shaped domain binding to HIV
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K12200        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005771        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007032        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031156        [VIEW IN EMBL-EBI]
GO:0031285        [VIEW IN EMBL-EBI]
GO:0031286        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032101        [VIEW IN EMBL-EBI]
GO:0032102        [VIEW IN EMBL-EBI]
GO:0032104        [VIEW IN EMBL-EBI]
GO:0032105        [VIEW IN EMBL-EBI]
GO:0032107        [VIEW IN EMBL-EBI]
GO:0032108        [VIEW IN EMBL-EBI]
GO:0032182        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0036257        [VIEW IN EMBL-EBI]
GO:0042173        [VIEW IN EMBL-EBI]
GO:0043130        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043621        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0043901        [VIEW IN EMBL-EBI]
GO:0043937        [VIEW IN EMBL-EBI]
GO:0043938        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045596        [VIEW IN EMBL-EBI]
GO:0045597        [VIEW IN EMBL-EBI]
GO:0045881        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0075260        [VIEW IN EMBL-EBI]
GO:0075262        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000242        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTCGGCGGCGGGGTCCTCCAACGTGATGCTCGCGATCCACGAGAAGAAGACTACCCCCACCGACCTCTACCGCCCGCTCCGCCTCTACATCGCCTCCGCCTACTCGGAGCGCGAGGCCGCCGCGGCCGACGACGACCTCAGCGCGGTGCGCGACCTCCGCGCCGAGGTCGAGCAGCCCTCCCTCCCGGACCCGTCCTCCCTCGAGCAGCGCCGCGACGCGCTCCTCGCCTACGCGCGGGCGCTCGCCCTCGTGGAGCCCCGCTTCCCCATCTCCCCCGACCGCGCCCACGTCCACTCCCTCACCTTCACCTGGCACGACGCCTTCAGGGGGAACAAGAAGTGCGCCCTCGCCTCCATCCACCTCGAGAAGGCCGCCGTGCTCTTCAACCTCGGCGCCGTCTACTCCCAGATCGCGCTTGCCGCGGACCGCTCCACCGATGTCGGGATCAGGACCGCGTGCGGCGCGTTCCAGAGCGCCGCGGGCGCGTTCGCGTGGCTCAGGGAGAGCGGGATCGCGGCCAAGGCCGTCGCCGCGGGGGCTACCACCGTGGACGTCACGCCCGAGTGTGCCGGCATGCTCGAGAAGCTCATGCTCGCGCAGGCGCAGGAGTGCTTCTTCGAGAAGGTCATTGGTGGAGGGAAGCCGCCCGCGCTGTGCTCCAAGGTGGCGCGGCAGGTGGGCATATTCTACGAAGAAGCATATGCATCTCTCAGTGCACCTCCTCTAAGTCAGCACTTCGATAAGTCATGGGTGTCTCATGTCCAGCTGAAGGCAGCCCAATTCTATGCTGATGCTTGTTATAGATATTCACTGGATCTTCATGAGAAAGAAGAAATTGCTGAGGAAATTGCACGCTTGAAGATTGGAATGAGCGCCTTGGCAGATGCTAAGAAGGCTGCAAAGGGAGTTGCTGCCCAGCTTCTGGATTCCGTCAACAAGCTGGAAAGTAACATGAAAACCAACTTGGAAAGGGCTATGAAGGAGAATGATCGTGTTTACCTGATGCGGGTTCCAGCTGCTGGTTCCTTGGGTGCCCTCCCTGCAGCATCACTTGTAAAGCCTACCTCTCTGGCTGAAGCTTTAGATGCCAGCAAGGAAAGGCTTTTTTCATCACTTGTGCCTGATGGCAGCATGAAAGCACTTTCCAAGTACACAGAGATGGTAGATAATATTATCCGGACTCAGGCAGAGAAATTGCAGCAAGCTAGTGAGATCGCTAGAGTCAGATTTAAGGAAATGGACTTACCAGATTCTATTCTTTCATTGGAAGGAAATATAACCTTACCCTTCGATCTGAAGGAAGATGTAGAGGCTGTGCAGATAAGTGGTGGGCCTGCTGCCTTGGAATCTGAGCTGCAGCAGCTTAGGGATTTGAGGAGGGTCAATCAGGAACTACTTGTTCAGACTGAAGAGCTTCTGCAGAAGGAGGCGAATGAAGATGCACAATTTCGTACGCAATTTGGGAGTCGCTGGACCAGACCTCAATCAAGCACCCTAACTAAAAACATTCAGGATCGATTGAATCTGTTTGCTGCTAATCTTAAGAAAGCTGCTGATAGTGACTCTTTGATTGAACGAGGCGTGAAGGAGAACTATCCCTTGATGTCTATTCTTGACAAACGACCAATAGAGTCTGCACTTCCAAGTATTTCTAGGCCTATCATGTCCTTGGATGGGAATGAAGATGCCATTGTTGGAGCCCTGAAACAAAGCTTGAGACAACTGGAATCTCTTGGAGCACAAAGGGCAGGTCTTGAAGACATGCTAAAAGAAATGAAAAGAAAGGATGATATACTGCCTAAGTTGATGGCTGGTGTTGGATCACATGACGATCTTTTCAAGAAGGAGATTGCTAAGTATGATTCTATCTGTGCTGAAATTGCTGATAACATTATGGCACAGGAACAATTATTGCTGCAAATACAGGCGCAAAACGAGCAATTTGCTGCTGTATTCAATCTAGAGGATTACAAAGCTGCTCGTGAGAGATGTTACAAGCAAATCGCTGCTGCTGTTGCTAAATACCGGGAGATTAAGAAGAACATCAATGAGGGCCTAAACTTTTATGTTACTTTACAGGAAGCAATTGGCAAAATAAAACAGCAGTGCAGTGACTTTATAATGACCCGAAACATTCAATGCCGTGAAATGATTGAAGATGTGCAGAGGAAGCTAGCGGGTTTCAACTTCTCATCCTCCAGCCACTCGTCTATGCAGAGGAATGCTTCTGTACCTCCTGATCAGAGCAGTCCATCACCACCGCCCCATGCTCAGGCCCCCATTGGGGGCGACTCCAGGCCTGGATACTCCCAACCGGAGCCAAGACCTGCATACTCACAGCCATACCCCCCGCCCTATGGCGCACCACCGCAACAGCCTCCATATGGCGCGCCACACCCCGGTCAGTACCAGCAGCCACCGCACCAGCCGCCTCCTGGTCACGACTACGGTCAGCCGGCATATCCTGGATGGCGCGGGCCGTACTACAACGCCCATCAACCTCAGCCGCAACAACCGGGCCCATATCCTCAGCCACCCTACAATGCCCCCGGGGCTTACCCTCCCCACCAGAGCAACAACTACTACAGGCCTCAATGA
Protein:  
MASAAGSSNVMLAIHEKKTTPTDLYRPLRLYIASAYSEREAAAADDDLSAVRDLRAEVEQPSLPDPSSLEQRRDALLAYARALALVEPRFPISPDRAHVHSLTFTWHDAFRGNKKCALASIHLEKAAVLFNLGAVYSQIALAADRSTDVGIRTACGAFQSAAGAFAWLRESGIAAKAVAAGATTVDVTPECAGMLEKLMLAQAQECFFEKVIGGGKPPALCSKVARQVGIFYEEAYASLSAPPLSQHFDKSWVSHVQLKAAQFYADACYRYSLDLHEKEEIAEEIARLKIGMSALADAKKAAKGVAAQLLDSVNKLESNMKTNLERAMKENDRVYLMRVPAAGSLGALPAASLVKPTSLAEALDASKERLFSSLVPDGSMKALSKYTEMVDNIIRTQAEKLQQASEIARVRFKEMDLPDSILSLEGNITLPFDLKEDVEAVQISGGPAALESELQQLRDLRRVNQELLVQTEELLQKEANEDAQFRTQFGSRWTRPQSSTLTKNIQDRLNLFAANLKKAADSDSLIERGVKENYPLMSILDKRPIESALPSISRPIMSLDGNEDAIVGALKQSLRQLESLGAQRAGLEDMLKEMKRKDDILPKLMAGVGSHDDLFKKEIAKYDSICAEIADNIMAQEQLLLQIQAQNEQFAAVFNLEDYKAARERCYKQIAAAVAKYREIKKNINEGLNFYVTLQEAIGKIKQQCSDFIMTRNIQCREMIEDVQRKLAGFNFSSSSHSSMQRNASVPPDQSSPSPPPHAQAPIGGDSRPGYSQPEPRPAYSQPYPPPYGAPPQQPPYGAPHPGQYQQPPHQPPPGHDYGQPAYPGWRGPYYNAHQPQPQQPGPYPQPPYNAPGAYPPHQSNNYYRPQ